2026

A. Tripathi, T.E. Kyawt, J. Shin, K. Won, A.T. Armstrong, G. Ilktach, P. Sullivan, H.A. Weilbaker, Y. Ko, S. Lee, W. Lee, B.R. Cooper, B.-K. Cho, J. Orjala, H. Lee, and H. Jeong, “Gut bacterial O-demethylation modulates systemic exposure to oral etoposide”, Gut Microbes, 18(1), 2628358, 2026 — Link   H. Bajpe, J. Shin, Y. … Read more

2025

J. Shin, M.H. Noh, S.H. Baek, J. Shin, J.H. Ahn, S.S. Yim, S. Jang, and H.G. Lim, “Systems and Synthetic Biology Approaches for Optimizing Microbial Cell Factories”, Korean Society for Biotechnology and Bioengineering Journal, 40(3): 214-228. 2025 — Link   E. A Catoiu, J. Krishnan, G. Li, X. A Lou, K. Rychel, Y. Yuan, H. … Read more

2024

J. Shin, D.C. Zielinski, B.O. Palsson, “Modulating Bacterial Function Utilizing A Knowledge Base of Transcriptional Regulatory Modules”, Nucleic Acids Research, gkae742. 2024 — Link   J. Shin, D.C. Zielinski, B.O. Palsson, “Deciphering Nutritional Stress Responses via Knowledge-Enriched Transcriptomics for Microbial Engineering”, Metabolic Engineering, vol. 84, 34-47. 2024 — Link

2023

J. Shin, K. Rychel, B.O. Palsson, “Systems biology of competency in bacteria is revealed by applying novel data analytics to the transcriptome”, Cell Reports, vol. 42, 112619. 2023 — Link   A.T. Rahman#, J. Shin#, C.H. Whang, W. Jung, D. Yoo, C. Seo, B.K. Cho, S. Jon, “Bilirubin Nanomedicine Rescues Intestinal Barrier Destruction and Restores Mucosal Immunity in … Read more

2022

Y. Song, J. Bae, S. Jin, H. Lee, S. Kang, J. Lee, J. Shin, S. Cho, B.K. Cho, “Development of highly characterized genetic bioparts for efficient gene expression in CO2-fixing Eubacterium limosum”, Metabolic Engineering, vol. 72, pp. 215-226, July 2022 — Link   J. Shin#, J.R. Noh#, D. Choe, N. Lee, Y. Song, S, Cho, E.J. Kang, M.J. … Read more

2021

J. Shin#, J.R. Noh#, D. Choe, N. Lee, Y. Song, S, Cho, E.J. Kang, M.J. Go, S.K. Ha, D.H. Chang, J.H. Kim, Y.H. Kim, K.S. Kim, H. Jung, M.H. Kim, B.H. Sung, S.G. Lee, D.H. Lee, B.C. Kim, C.H. Lee, B.K. Cho, “Microbiome analysis of ageing and rejuvenation models reveals changes in key microbial communities … Read more

2020

S. Jin, J. Bae, Y. Song, N. Pearcy, J. Shin, S. Kang, N.P. Minton, P. Soucaille, B.K. Cho, “Synthetic biology on acetogenic bacteria for highly efficient conversion of C1 gases to biochemicals”, International Journal of Molecular Sciences, vol. 21, 7639, Oct 2020. Link   Y. Jeon, M.S. Jeon,J. Shin, S. Jin, J. Yi, S. Kang, S.C. Kim, B.K. … Read more

2019

J. Shin#, S. Kang#, Y. Song, S. Jin, J. Lee, J.K. Lee, D.R. Kim, S.C. Kim, S. Cho, B.K. Cho, “Genome engineering of Eubacterium limosum using expended genetic tools and CRISPR-Cas9 system”, ACS Synthetic Biology. vol. 8, pp. 2059-2068, Aug 2019. Link   J. Shin#, J.R. Noh#, D.H. Chang, Y.H. Kim, M.H. Kim, E.S. Lee, S. Cho, … Read more

2018

Y. Song, J. Shin, S. Jin, J.K. Lee, D.R. Kim, S.C. Kim, S. Cho, B.K. Cho, “Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth”, BMC Genomics, vol. 19, 837, Nov 2018. Link   J. Shin, Y. Song, S. Jin, J.K. Lee, D.R. Kim, S.C. Kim, S. Cho, B.K. Cho, “Genome-scale analysis … Read more

2017

Y. Song, J. Shin, Y. Jeong, S. Jin, J.K. Lee, D.R. Kim, S.C. Kim, S. Cho, B.K. Cho, “Determination of the genome and primary transcriptome of syngas fermenting Eubacterium limosum ATCC 8486”, Scientific Reports, vol. 7, 13694, Oct 2017. Link